PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN06054.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 335aa    MW: 36903.9 Da    PI: 7.3229
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN06054.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.31.9e-154695255
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r +h+  E+rRR++iN++f+ Lr+l+P++    ++K + a+ L +++eY+++Lq
  KHN06054.1 46 RSKHSVTEQRRRSKINERFQILRDLIPHS----DQKRDTASFLLEVMEYVQYLQ 95
                899*************************9....8*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.23E-1842115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.7E-2243112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.6184494IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.7E-134695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.20E-144699No hitNo description
SMARTSM003531.6E-1150100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MRAGKGSQEE DEYEEEEFGS SKKQGTSSAP NANKDGKAID KASAIRSKHS VTEQRRRSKI  60
NERFQILRDL IPHSDQKRDT ASFLLEVMEY VQYLQEKVQK YEGSYQGWGQ EPLKLMPWRN  120
SHWRVQSFAG QPTAVKNGLG PVSPFPVKFD ESNASISPTM LSGTQNTIDP YQSRDIVNKT  180
AERQPDLVNK GMPLPLAMHA NMSVPVRSDG VLAHPLHGTV SDPQSTECPT TSEPQNQQDE  240
FTVEGGTISI SSAYSQGLLN NLTQALQSAG LDLSQASISV QINLGKRGNK GLSCGTSSPK  300
HHDNPSSNNQ TIAHFRDAGS GEDSDQVQKR MKTYK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0935250.0BT093525.1 Soybean clone JCVI-FLGm-24O3 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001239754.10.0uncharacterized protein LOC100795416
SwissprotQ9CAA41e-114BIM2_ARATH; Transcription factor BIM2
TrEMBLA0A0B2PEV80.0A0A0B2PEV8_GLYSO; Transcription factor BIM2
TrEMBLC6T7U10.0C6T7U1_SOYBN; Uncharacterized protein
STRINGGLYMA01G09010.50.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17303382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-110BES1-interacting Myc-like protein 2
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]